List of Archaea genera

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Template:Short description This article lists the genera of the Archaea. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[2] However, in the List provided below, GTDB has precedence unless otherwise noted.

Phylogeny

National Center for Biotechnology Information (NCBI) taxonomy was initially used to decorate the genome tree via tax2tree. The 16S rRNA-based Greengenes taxonomy is used to supplement the taxonomy particularly in regions of the tree with no cultured representatives. List of Prokaryotic names with Standing in Nomenclature (LPSN) is used as the primary taxonomic authority for establishing naming priorities. Taxonomic ranks are normalised using phylorank and the taxonomy manually curated to remove polyphyletic groups.[3][4][5][6][7]

Cladogram was taken from the GTDB release 10-RS226 (16th April 2025).[8][9][10] The position of clades with a "question mark" are based on the additional phylogeny of the 16S rRNA-based LTP_12_2021 by The All-Species Living Tree Project.[11][12][13]

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Phylum Microcaldota

Class Microcaldia

Order Microcaldales

  • Family Microcaldaceae Sakai et al. 2023

Phylum "Altarchaeota"

Class "Altarchaeia"

Order "Altarchaeales"

  • Family "Altarchaeaceae" corrig. Probst et al. 2014

Phylum "Iainarchaeota"

Class "Iainarchaeia"

Order "Forterreales"

  • Family "Forterreaceae" Pallen, Rodriguez-R & Alikhan 2022
    • "Candidatus Forterrea" Probst & Banfield 2017

Order "Iainarchaeales"

  • Family "Iainarchaeaceae" Rinke et al. 2020

Phylum "Micrarchaeota"

Template:Cladogram

Class "Micrarchaeia"

Order "Norongarragalinales"

  • Family "Norongarragalinaceae" Vázquez-Campos et al. 2021

Order "Micrarchaeales"

  • Family "Micrarchaeaceae" Vázquez-Campos et al. 2021

Order "Anstonellales"

  • Family "Anstonellaceae" Vázquez-Campos et al. 2021
    • "Candidatus Anstonella" Vázquez-Campos et al. 2021
  • Family "Bilamarchaeaceae" Vázquez-Campos et al. 2021

Order "Gugararchaeales"

  • Family "Gugararchaeaceae" Vázquez-Campos et al. 2021

Order "Burarchaeales"

  • Family "Burarchaeaceae" Vázquez-Campos et al. 2021

Order "Fermentimicrarchaeales"

  • Family "Fermentimicrarchaeaceae" Kadnikov et al. 2020 (Sv326)

Phylum "Undinarchaeota"

Class "Undinarchaeia"

Order "Undinarchaeales"

  • Family "Naiadarchaeaceae" Dombrowski et al. 2020
  • Family "Undinarchaeaceae" Dombrowski et al. 2020

Phylum "Huberarchaeaota"

Class "Huberarchaeia"

Order "Huberarchaeales"

  • Family "Huberarchaeaceae" Rinke et al. 2020

Phylum "Aenigmatarchaeota"

Class "Aenigmatarchaeia"

Order "Aenigmatarchaeales"

  • Family "Aenigmatarchaeaceae" corrig. Rinke et al. 2020

Phylum "Nanohalarchaeota"

Template:Cladogram

Class "Nanohalarchaeia"

Order "Nanohalarchaeales"

  • Family "Nanohalarchaeaceae"

Order "Nanohydrothermales"

  • Family "Nanohydrothermaceae" Xie et al. 2022

Order "Nucleotidisoterales"

  • Family "Nanosalenecaceae" Xie et al. 2022
  • Family "Nucleotidisoteraceae" Xie et al. 2022
  • Family "Nucleotidivindicaceae" Xie et al. 2022

Class "Nanohalobiia"

Order "Nanohalobiales"

Phylum Nanobdellota

Template:Cladogram

Class Nanobdellia

Nanobdellia incertae sedis

Order JAPDLS01

  • Family "Haiyanarchaeaceae" Rao et al. 2023

Order "Jingweiarchaeales"

  • Family "Jingweiarchaeaceae" Rao et al. 2023

Order Nanobdellales

  • Family "Nanoarchaeaceae" Huber et al. 2011
  • Family Nanobdellaceae Kato et al. 2022 ["Nanopusillaceae" Huber et al. 2011]
    • Nanobdella Kato et al. 2022 ["Candidatus Nanobsidianus" Castelle et al. 2015; "Candidatus Nanopusillus" Wurch et al. 2016]
    • "Candidatus Nanoclepta" St. John et al. 2019

Order "Tiddalikarchaeales"

  • Family "Tiddalikarchaeaceae" Vázquez-Campos et al. 2021

Order "Parvarchaeales"

Phylum Promethearchaeota

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Promethearchaeota incertae sedis

  • Class "Balderarchaeia"
    • Order "Balderarchaeales"
      • Family "Balderarchaeaceae" (sic) Xie et al. 2022
  • Class "Tyrarchaeia"
    • Order "Tyrarchaeales"
      • Family "Tyrarchaeaceae" Xie et al. 2022

Class "Asgardarchaeia"

Order "Asgardarchaeales"

  • Family "Asgardarchaeaceae" Eme et al. 2023 ex Tamarit et al. 2024

Class "Atabeyarchaeia"

Order "Atabeyarchaeales"

  • Family "Asgardarchaeaceae" Eme et al. 2023 ex Tamarit et al. 2024

Class "Sifarchaeia"

Order "Borrarchaeales"

  • Family "Borrarchaeaceae" Liu et al. 2021

Order "Sifarchaeales"

  • Family "Sifarchaeaceae" Sun et al. 2021
    • "Candidatus Sifarchaeum" corrig. Farag, Zhao & Biddle 2020

Class "Wukongarchaeia"

Order "Wukongarchaeales"

  • Family "Wukongarchaeaceae" Liu et al. 2021

Class "Njordarchaeia"

Order "Njordarchaeales"

  • Family "Njordarchaeaceae" Xie et al. 2022
  • Family "Panguiarchaeaceae" Qu et al. 2023

Class "Heimdallarchaeia"

Order "Hodarchaeales"

  • Family "Hodarchaeaceae" Liu et al. 2021

Order "Gerdarchaeales"

Order "Heimdallarchaeales"

  • Family "Kariarchaeaceae" Liu et al. 2021
  • Family "Heimdallarchaeaceae" ?Wu et al. 2022

Class "Odinarchaeia"

Order "Odinarchaeales"

  • Family "Odinarchaeaceae" Tamarit et al. 2022

Class "Jordarchaeia"

Order "Jordarchaeales"

  • Family "Freyrarchaeaceae" Xie et al. 2022
  • Family "Jordarchaeaceae" Sun et al. 2021

Class "Baldrarchaeia"

Order "Baldrarchaeales"

  • Family "Baldrarchaeaceae" corrig. Liu et al. 2021

Class "Thorarchaeia"

Order "Thorarchaeales"

Class "Hermodarchaeia"

Order "Hermodarchaeales"

  • Family "Hermodarchaeaceae" corrig. Liu et al. 2021

Class Promethearchaeia

Order "Helarchaeales"

Order Promethearchaeales

In GTDB as order CR-4 Template:Cladogram

Phylum "Korarchaeota"

Class "Korarchaeia"

Order "Korarchaeales"

Phylum Thermoproteota

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Thermoproteota Incertae sedis

Class "Bathyarchaeia"

Order "Bifangarchaeales"

  • Family "Bifangicolaceae" Hou et al. 2023
    • ?"Candidatus Bifangicola" Hou et al. 2023 [3300025546_26]
  • Family "Bifangarchaeaceae" Hou et al. 2023
    • "Candidatus Bifangarchaeum" corrig. Hou et al. 2023 [B24: DTBU01 sp011374155]
  • Family "Bifangistellaceae" Hou et al. 2023
    • "Candidatus Bifangistella" Hou et al. 2023 [DRYS01: DRYS01 sp011367275]

Order "Xuanwuarculales"

  • Family "Mazuisomaceae" Hou et al. 2023
  • Family "Mazuicellaceae" Hou et al. 2023
  • Family "Mazuousiaecae" Hou et al. 2023
  • Family "Xuanwuarculaceae" Hou et al. 2023
    • "Candidatus Xuanwuarcula" Hou et al. 2023 [RBG-16-48-13 sp001775995]

Order "Hecatellales"

Template:Cladogram

  • Family "Hecatellaceae" Rinke et al. 2020

Order "Houtuarculales"

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  • Family "Houtuithermaceae" Hou et al. 2023
  • Family "Marihoutuimonadaceae" Hou et al. 2023
  • Family "Crenohoutuithermaceae" Hou et al. 2023
  • Family "Fontihoutuithermaceae" Hou et al. 2023
  • Family "Aphrohoutuibellaceae" Hou et al. 2023
  • Family "Houtuousiaceae" Hou et al. 2023

Order "Wuzhiqiibiales"

Template:Cladogram

  • Family "Wuzhiqiithermaceae" Hou et al. 2023
  • Family "Wuzhiqiitorraceae" Hou et al. 2023
  • Family "Wuzhiqiimorphaceae" Hou et al. 2023
    • "Candidatus Wuzhiqiimorpha" Hou et al. 2023 [PIYN01: PIYN01 sp003601775]
  • Family "Wuzhiqiimonadaceae" Hou et al. 2023
  • Family "Wuzhiqiibiaceae" Hou et al. 2023

Order "Zhuquarculales"

  • Family "Zhuquarculaceae" Hou et al. 2023
  • Family "Zhuquomorphaceae" Hou et al. 2023

Order "Bathyarchaeales"

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Class Nitrososphaeria_A

Order "Caldarchaeales"

Template:Cladogram

  • Family "Calditenuaceae" Balbay et al. 2023
  • Family "Caldarchaeaceae" Rinke et al. 2020
  • Family "Wolframiiraptoraceae" Buessecker et al. 2022

Class Nitrososphaeria

Nitrososphaeria Incertae sedis

Order "Nitrosomirales"

Order "Geothermarchaeales"

Order PSMU01

Order "Conexivisphaerales"

  • Family "Conexivisphaeraceae" Kato et al. 2021 (THSC Group)

Order Nitrososphaerales

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Class "Methanomethylicia"

Methanomethylicia incertae sedis

  • Order "Methanohydrogenicales"
    • Family "Methanohydrogenicaceae" Berghuis et al. 2019
  • Order "Methanomethylarchaeales"
    • Family "Methanomethylarchaeceae" corrig. Hua et al. 2019
  • Order "Methanomethylovorales"
    • Family "Methanomethylovoraceae" Hua et al. 2019

Order "Nezhaarchaeales"

Order "Culexarchaeles"

  • Family "Culexarchaeaceae" Kohtz et al. 2022 ["Methanomediaceae" Berghuis et al. 2019]
    • "Candidatus Culexarchaeum" Kohtz et al. 2022 ["Candidatus Methanomedium" Berghuis et al. 2019]
  • Family "Culexmicrobiaceae" Kohtz et al. 2022

Order "Methanomethylicales"

Class Thermoproteia

Order "Gearchaeales"

  • Family "Gearchaeaceae" corrig.

Order Thermofilales

Order Thermoproteales

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Class "Sulfolobia"

Order "Marsarchaeales"

Order Sulfolobales

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Phylum "Hadarchaeota"

Class "Persephonarchaeia"

Class "Hadarchaeia"

Order "Hadarchaeales"

  • Family "Cerberiarchaeaceae" Benito Merino et al. 2024
  • Family "Hadarchaeaceae" Chuvochina et al. 2019 ex Chuvochina et al. 2023

Phylum Methanobacteriota_B

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Class "Theionarchaeia"

Class Thermococci

Order "Methanofastidiosales"

  • Family "Methanofastidiosaceae" Rinke et al. 2020

Order Thermococcales

Phylum "Hydrothermarchaeota"

Class "Hydrothermarchaeia"

Order "Hydrothermarchaeales"

  • Family BMS3B
  • Family "Hydrothermarchaeaceae" Chuvochina et al. 2019

Phylum Methanobacteriota

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Class "Methanococcia"

Order Methanococcales

Class Methanopyria

Order Methanopyrales

Class Methanobacteriia

Order Methanobacteriales

Phylum Thermoplasmatota

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Class "Izemarchaea"

Order "Thermoprofundales"

  • (MBG-D, E2)

Class "Poseidoniia"

Order MGIII

Order "Poseidoniales"

  • Family "Poseidoniaceae" corrig. Rinke et al. 2019
  • Family "Thalassarchaeaceae" corrig. Rinke et al. 2019

Class Thermoplasmata

Order "Lunaplasmatales"

  • Family "Lunaplasmataceae" Zinke et al. 2021

Order "Proteinoplasmatales"

  • (SG8-5)

Order "Yaplasmatales"

  • (RBG-16-68-12)

Order "Gimiplasmatales"

  • Family "Gimiplasmataceae" Hu et al. 2020

Order "Sysuiplasmatales"

  • Family "Sysuiplasmataceae" Yuan et al. 2021

Order Methanomassiliicoccales

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Order "Halarchaeoplasmatales"

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Order "Lutacidiplasmatales"

  • Family "Lutacidiplasmataceae" Sheridan et al. 2022

Order "Aciduliprofundales"

  • Family "Aciduliprofundaceae" Rinke et al. 2020

Order Thermoplasmatales

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Phylum Halobacteriota

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Halobacteriota incertae sedis

Order "Methanoflorentales"

  • Family "Methanoflorentaceae" Mondav et al. 2014

Class "Methanonatronarchaeia"

Order "Methanonatronarchaeales"

Class "Methanoliparia"

Order "Methanoliparales"

Class "Archaeoglobia"

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Order "Mnemosynellales"

  • Family "Mnemosynellaceae" Adam et al. 2022

Order Archaeoglobales

Class "Syntropharchaeia"

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Order "Syntropharchaeales"

  • Family "Syntropharchaeaceae" corrig. (ANME-2 cluster)

Order "Alkanophagales"

  • Family "Methanophagaceae" Chadwick et al. 2022
  • Family ?"Veteromethanophagaceae" Vulcano et al. 2022
  • Family "Alkanophagaceae" [B39-G2]
  • Family "Methanospiraraceae" Laso-Pérez et al. 2022

Class Methanocellia

Order Methanocellales

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Class Methanosarcinia

Order Methanotrichales

Order Methanosarcinales_A

  • Family Methermicoccaceae Cheng et al. 2007

Order Methanosarcinales

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Class Methanomicrobia

Order Methanomicrobiales

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Class "Hikarchaeia"

Order "Hikarchaeales"

  • Family "Hikarchaeaceae" Martijn et al. 2020 (MG-IV)

Class "Ordosarchaeia"

Order "Ordosarchaeales"

  • Family "Ordosarchaeaceae" Zhao et al. 2024

Class Halobacteria

Order Halorutilales

  • Family Halorutilaceae Durán-Viseras et al. 2023

Order Halobacteriales

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See also

References

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  14. a b c Ruize Xie, Yinzhao Wang, Danyue Huang, Jialin Hou, Liuyang Li, Haining Hu, Xiaoxiao Zhao, Fengping Wang: Expanding Asgard members in the domain of Archaea sheds new light on the origin of eukaryotes. In: Science China Life Sciences, vol. 65, p. 818–829, April 2022. doi:10.1007/s11427-021-1969-6, PMID 34378142. Epub: Aug. 6, 2021. Along with:Njordarchaeota, a new candidate for a sister group to eukaryotes. EurekAlert!, Oct. 20, 2021.
  15. LPSN: Order "Candidatus Njordarchaeales"
  16. a b Fabai Wu, Daan R. Speth, Alon Philosof, Antoine Crémière, Aditi Narayanan, Roman A. Barco, Stephanie A. Connon, Jan P. Amend, Igor A. Antoshechkin, Victoria J. Orphan: Unique mobile elements and scalable gene flow at the prokaryote–eukaryote boundary revealed by circularized Asgard archaea genomes. In: Nature Microbiology volume 7, p. 200–212, Jan 13, 2022. doi:10.1038/s41564-021-01039-y, PMID 35027677, Template:PMC. See also Extended Data Fig. 2.
  17. LPSN: Order "Candidatus Freyrarchaeales"
  18. LPSN: Family "Candidatus Sigynarchaeaceae"

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Template:Archaea classification