Chromosome 8

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Template:Short description Template:Infobox chromosome Chromosome 8 is one of the 23 pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 8 spans about 146 million base pairs (the building material of DNA) and represents between 4.5 and 5.0% of the total DNA in cells.[1]

About 8% of its genes are involved in brain development and function, and about 16% are involved in cancer. A unique feature of 8p is a region of about 15 megabases that appears to have a high mutation rate. This region shows a significant divergence between human and chimpanzee, suggesting that its high mutation rates have contributed to the evolution of the human brain.[1]

Genes

Number of genes

The following are some of the gene count estimates of human chromosome 8. Because researchers use different approaches to genome annotation their predictions of the number of genes on each chromosome varies (for technical details, see gene prediction). Among various projects, the collaborative consensus coding sequence project (CCDS) takes an extremely conservative strategy. So CCDS's gene number prediction represents a lower bound on the total number of human protein-coding genes.[2]

Estimated by Protein-coding genes Non-coding RNA genes Pseudogenes Source Release date
CCDS 646 [3] 2016-09-08
HGNC 656 242 539 [4] 2017-05-12
Ensembl 670 1,052 613 [5] 2017-03-29
UniProt 703 [6] 2018-02-28
NCBI 719 848 682 [7][8][9] 2017-05-19

Gene list

Script error: No such module "Category see also".Template:Category see also/Category pair check The following is a partial list of genes on human chromosome 8. For complete list, see the link in the infobox on the right. Template:Columns-list

Diseases and disorders

The following diseases and disorders are some of those related to genes on chromosome 8: Template:Div col

Cytogenetic band

Template:Multiple image

G-bands of human chromosome 8 in resolution 850 bphs[14]
Chr. Arm[15] Band[16] ISCN
start[17]
ISCN
stop[17]
Basepair
start
Basepair
stop
Stain[18] Density
8 p 23.3 0 115 Template:Val Template:Val gneg
8 p 23.2 115 331 Template:Val Template:Val gpos 75
8 p 23.1 331 690 Template:Val Template:Val gneg
8 p 22 690 992 Template:Val Template:Val gpos 100
8 p 21.3 992 1179 Template:Val Template:Val gneg
8 p 21.2 1179 1380 Template:Val Template:Val gpos 50
8 p 21.1 1380 1639 Template:Val Template:Val gneg
8 p 12 1639 1897 Template:Val Template:Val gpos 75
8 p 11.23 1897 2041 Template:Val Template:Val gneg
8 p 11.22 2041 2156 Template:Val Template:Val gpos 25
8 p 11.21 2156 2343 Template:Val Template:Val gneg
8 p 11.1 2343 2472 Template:Val Template:Val acen
8 q 11.1 2472 2645 Template:Val Template:Val acen
8 q 11.21 2645 2817 Template:Val Template:Val gneg
8 q 11.22 2817 3033 Template:Val Template:Val gpos 75
8 q 11.23 3033 3277 Template:Val Template:Val gneg
8 q 12.1 3277 3493 Template:Val Template:Val gpos 50
8 q 12.2 3493 3622 Template:Val Template:Val gneg
8 q 12.3 3622 3809 Template:Val Template:Val gpos 50
8 q 13.1 3809 3938 Template:Val Template:Val gneg
8 q 13.2 3938 4096 Template:Val Template:Val gpos 50
8 q 13.3 4096 4312 Template:Val Template:Val gneg
8 q 21.11 4312 4545 Template:Val Template:Val gpos 100
8 q 21.12 4545 4628 Template:Val Template:Val gneg
8 q 21.13 4628 4858 Template:Val Template:Val gpos 75
8 q 21.2 4858 4959 Template:Val Template:Val gneg
8 q 21.3 4959 5289 Template:Val Template:Val gpos 100
8 q 22.1 5289 5577 Template:Val Template:Val gneg
8 q 22.2 5577 5692 Template:Val Template:Val gpos 25
8 q 22.3 5692 5922 Template:Val Template:Val gneg
8 q 23.1 5922 6152 Template:Val Template:Val gpos 75
8 q 23.2 6152 6267 Template:Val Template:Val gneg
8 q 23.3 6267 6611 Template:Val Template:Val gpos 100
8 q 24.11 6611 6726 Template:Val Template:Val gneg
8 q 24.12 6726 6942 Template:Val Template:Val gpos 50
8 q 24.13 6942 7244 Template:Val Template:Val gneg
8 q 24.21 7244 7431 Template:Val Template:Val gpos 50
8 q 24.22 7431 7661 Template:Val Template:Val gneg
8 q 24.23 7661 7804 Template:Val Template:Val gpos 75
8 q 24.3 7804 8250 Template:Val Template:Val gneg

References

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External links

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  15. "p": Short arm; "q": Long arm.
  16. For cytogenetic banding nomenclature, see article locus.
  17. a b These values (ISCN start/stop) are based on the length of bands/ideograms from the ISCN book, An International System for Human Cytogenetic Nomenclature (2013). Arbitrary unit.
  18. gpos: Region which is positively stained by G banding, generally AT-rich and gene poor; gneg: Region which is negatively stained by G banding, generally CG-rich and gene rich; acen Centromere. var: Variable region; stalk: Stalk.