imported>I dream of horses: /* top */Autowikibrowser cleanup, added orphan tag

2022-11-08T07:35:57Z

top: Autowikibrowser cleanup, added orphan tag

New page

{{Orphan|date=November 2022}}

<noinclude>This table of [[client (computing)|client]] [[application software|application]]s for the [[Distributed Annotation System]] has been created primarily for inclusion in its [[Distributed Annotation System|parent page]]. The parent page puts the table in context, and you should go there for more information. The table is provided in a separate page so that it can be [[transcluded]] where necessary.

== Table follows ==
</noinclude>
{| class="wikitable"
! Name !! Description !! Links
|-
| [[BioJava]] DAS Client || ||
|-
| Dasty || A web client for visualizing protein sequence feature information using DAS || [http://www.ebi.ac.uk/dasty/] [http://www.ebi.ac.uk/das-srv/uniprot/dasty/index.jsp?id=Q24488]
|-
| DasView || A server-side Perl application. This tool is mentioned in the original DAS publication, but has subsequently disappeared. ||
|-
| [[EnsEMBL]] || The [[EnsEMBL]] Genome Browser. Provides built-in support for DAS || [http://www.ensembl.org/]
|-
| Geodesic || An stand-alone Java application || [http://www.biodas.org/geodesic/]
|-
| [[Integrated Genome Browser|IGB]] || The [[Integrated Genome Browser]] (IGB, pronounced "ig-bee") is an application built upon the GenoViz SDK and Genometry for visualization and exploration of genomes and corresponding annotations from multiple data sources || [http://genoviz.sourceforge.net/]
|-
| [[Jalview]] || A multiple sequence alignment editor & viewer || [http://www.jalview.org/]
|-
| OmniGene || The user interface is based on the EnsEMBL interface || [http://omnigene.sourceforge.net/] [http://sourceforge.net/projects/omnigene/]
|-
| SIMAP || Similarity Matrix of Proteins || [https://web.archive.org/web/20120830115848/http://liferay.csb.univie.ac.at/portal/web/simap/webservice] [http://ws.csb.univie.ac.at:8080/das]{{dead link|date=December 2016 |bot=InternetArchiveBot |fix-attempted=yes }}
|-
| SPICE || A browser for the annotations for protein sequences and structures || [http://www.efamily.org.uk/software/dasclients/spice] [http://www.spice-3d.org/] [http://www.spice-3d.org/dasobert/]
|-
| STRAP || Underlining sequence features in multiple alignments. Example output: [https://web.archive.org/web/20090613045440/http://www.charite.de/bioinf/strap/exampleOutput.html] || [http://3d-alignment.eu/]
|-
| [[The Institute for Genomic Research|TIGR]] DAS Viewer || || [https://web.archive.org/web/20070816053133/http://www.tigr.org/tdb/DAS/dasview.html]
|-
| [[WormBase]] || The WormBase genome Browser. Includes a DAS viewer named DASView ||
|}

[[Category:Bioinformatics]]

Distributed Annotation System/Clients - Revision history

imported>I dream of horses: /* top */Autowikibrowser cleanup, added orphan tag